从netcdf进行数据绘制,在等位线图上不绘制经度为0的数据

问题描述 投票:1回答:1

我开始使用网格数据开始我的旅程,而我一直在尝试从带有cartopy的netcdf文件中绘制一些温度数据。我遵循了一些示例,但我不明白为什么我的地块中间有一条白线。 (我已经检查了数据,矩阵充满了数字,没有NaN)

import cartopy.crs as ccrs
import matplotlib.pyplot as plt
import numpy as np
import xarray as xr
from cartopy.mpl.ticker import LongitudeFormatter, LatitudeFormatterimport glob


data = xr.open_dataset('aux1.nc')
lat = data.lat
lon = data.lon
time = data.time
Temp = data.air


#Calculo la temperatura media anual
Tanual = Temp.resample(time="y").mean()
#Promedio de todos los meses
Tprom = Temp.mean(dim="time").values


#Grafico
fig = plt.figure(figsize=(10, 4))
ax = fig.add_subplot(1, 1, 1, projection=ccrs.PlateCarree())
ax.coastlines()
ax.set_global()
ct = ax.contourf(lon,lat,Tprom,transform=ccrs.PlateCarree(),cmap="bwr")
ax.gridlines()
cb = plt.colorbar(ct,orientation="vertical",extendrect='True')
cb.set_label("Temperatura [°C]")
ax.set_xticks(np.arange(-180,181,60), crs=ccrs.PlateCarree())
ax.set_yticks(np.arange(-90,91,30), crs=ccrs.PlateCarree())
lon_formatter = LongitudeFormatter(zero_direction_label=True)
lat_formatter = LatitudeFormatter()
ax.xaxis.set_major_formatter(lon_formatter)
ax.yaxis.set_major_formatter(lat_formatter)

https://i.stack.imgur.com/aPHz4.jpg

python netcdf python-xarray cartopy
1个回答
0
投票

好问题!问题在于,对于大多数栅格化的气候数据而言,经度坐标类似于:

array([1.25, 3.75, 6.25, ..., 351.25, 353.75, 356.25, 358.75])

因此没有明确的longitude=0点,这通常在绘图中为您提供一条细白线。我有时也会在已发表的论文(甚至是《自然》)中看到这个问题!

有很多方法可以解决此问题,但是最简单的方法是使用cartopy程序包,该程序包具有一个名为add_cyclic_point的实用程序,该实用程序基本上可以在longitude=0点的任一侧插入数据。 (参考:https://scitools.org.uk/cartopy/docs/v0.15/cartopy/util/util.html

此方法的唯一缺点是,当使用xarray时,它意味着您必须手动提取数据,然后丢失元数据,因此,我编写了一个函数,以在保持元数据的同时保持其良好易用性。

from cartopy.util import add_cyclic_coord
import xarray as xr 

def xr_add_cyclic_point(da):
    """
    Inputs
    da: xr.DataArray with dimensions (time,lat,lon)
    """

    # Use add_cyclic_point to interpolate input data
    lon_idx = da.dims.index('lon')
    wrap_data, wrap_lon = add_cyclic_point(da.values, coord=da.lon, axis=lon_idx)

    # Generate output DataArray with new data but same structure as input
    outp_da = xr.DataArray(data=wrap_data, 
                           coords = {'time': da.time, 'lat': da.lat, 'lon': wrap_lon}, 
                           dims=da.dims, 
                           attrs=da.attrs)

    return outp_da

示例

例如,如果我的初始DataArray看起来像:

<xarray.DataArray 'tas' (time: 60, lat: 90, lon: 144)>
[777600 values with dtype=float32]
Coordinates:
  * lat      (lat) float64 -89.49 -87.98 -85.96 -83.93 ... 85.96 87.98 89.49
  * lon      (lon) float64 1.25 3.75 6.25 8.75 11.25 ... 351.3 353.8 356.2 358.8
  * time     (time) object 1901-01-16 12:00:00 ... 1905-12-16 12:00:00
Attributes:
    long_name:         Near-Surface Air Temperature
    units:             K
    valid_range:       [100. 400.]
    cell_methods:      time: mean
    standard_name:     air_temperature
    original_units:    deg_k
    original_name:     t_ref
    cell_measures:     area: areacella
    associated_files:  baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation...

当我绘制时间平均值时,给出以下内容:

tas.mean(dim='time').plot.contourf()

enter image description here

现在,我可以使用我的函数来生成一个新的,内插的DataArray,如下所示:

wrapped_tas = xr_add_cyclic_point(tas)
wrapped_tas

<xarray.DataArray (time: 60, lat: 90, lon: 145)>
array([[[251.19466, 251.19469, 251.19472, ..., 251.19226, 251.19073,
         251.19466], ...
        [250.39403, 250.39468, 250.39961, ..., 250.39429, 250.39409,
         250.39403]]], dtype=float32)
Coordinates:
  * time     (time) object 1901-01-16 12:00:00 ... 1905-12-16 12:00:00
  * lat      (lat) float64 -89.49 -87.98 -85.96 -83.93 ... 85.96 87.98 89.49
  * lon      (lon) float64 1.25 3.75 6.25 8.75 11.25 ... 353.8 356.2 358.8 361.2
Attributes:
    long_name:         Near-Surface Air Temperature
    units:             K
    valid_range:       [100. 400.]
    cell_methods:      time: mean
    standard_name:     air_temperature
    original_units:    deg_k
    original_name:     t_ref
    cell_measures:     area: areacella
    associated_files:  baseURL: http://cmip-pcmdi.llnl.gov/CMIP5/dataLocation...

您可以看到,经度坐标已从144-> 145的长度延长了一个点,这意味着它现在“环绕”了longitude=0点。

此新的DataArray在绘制时给出了没有白线的图:)

wrapped_tas.mean(dim='time').plot.contour()

enter image description here

希望有帮助!! :)

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