[我在位桶管道中的amazonlinux:2018.03.0.20190212
docker映像上构建R时遇到错误。奇怪的是,如果我运行EC2(Amazon Linux 2018),我可以运行完全相同的命令而不会出错。
有人知道如何解决这个问题吗?
make[6]: Entering directory `/opt/R/src/library/graphics/src'
mkdir -p -- ../../../../library/graphics/libs
make[6]: Leaving directory `/opt/R/src/library/graphics/src'
make[5]: Leaving directory `/opt/R/src/library/graphics/src'
make[4]: Leaving directory `/opt/R/src/library/graphics'
make[4]: Entering directory `/opt/R/src/library/graphics'
byte-compiling package 'graphics'
Error : .onLoad failed in loadNamespace() for 'utils', details:
call: system(paste(which, shQuote(names[i])), intern = TRUE, ignore.stderr = TRUE)
error: error in running command
Error: unable to load R code in package 'graphics'
Execution halted
手动,在EC2上:
make[6]: Leaving directory `/opt/R/src/library/graphics/src'
make[5]: Leaving directory `/opt/R/src/library/graphics/src'
make[4]: Leaving directory `/opt/R/src/library/graphics'
make[4]: Entering directory `/opt/R/src/library/graphics'
byte-compiling package 'graphics'
make[4]: Leaving directory `/opt/R/src/library/graphics'
make[3]: Leaving directory `/opt/R/src/library/graphics'
make[3]: Entering directory `/opt/R/src/library/stats'
building package 'stats'
我对R不太熟悉,没有发现特别有用的错误消息。
我也有同样的问题,尽管不是Docker,而是Singularity。对我来说,事实证明我缺少容器中的“哪个”二进制文件。安装完“哪个”软件包(我在CentOS7上)后,我能够继续前进,并通过了该错误。