比较和链路串用不同的词语顺序/字数

问题描述 投票:2回答:2

我试图用recordLinkage包两个数据集连接在一起,其中一个数据集往往给多个最后/中间名,另一只是给了一个姓。目前该活动正用于字符串比较函数但是哈罗 - 温克勒函数返回的得分取决于如何串被偶然匹配起来,而不是如果短字符串的内容被包含在较长的字符串的任何地方。正在创建许多质量差的链路上是领先的。是错误的权重重复的例子如下:

library(RecordLinkage)
data1 <- as.data.frame(list("lname" = c("lolli gaggen nazeem", "lolli gaggen nazeem", "lolli gaggen nazeem"),
                           "bday" = c("1908-08-08", "1979-12-12", "1560-06-06") ) )

data2 <- as.data.frame(list("lname" = c("lolli", "gaggen", "nazeem"),
                           "bday" = c("1908-08-08", "1979-12-12", "1560-06-06") ) )

blocking_variable <- c("bday")
pass <- compare.linkage(data1, data2, blockfld = blocking_variable, strcmp = T)
pass_weights <- epiWeights(pass)
getPairs(pass_weights, single.rows = TRUE)

  id1              lname.1     bday.1 id2 lname.2     bday.2    Weight
1   1 lolli gaggen nazheem 1908-08-08   1   lolli 1908-08-08 0.9162463
2   2 lolli gaggen nazheem 1979-12-12   2  gaggen 1979-12-12 0.8697165
3   3 lolli gaggen nazheem 1560-06-06   3 nazheem 1560-06-06 0.6995502

我想ID的2&3接收大致相同的权重为ID#1但是目前他们要低得多,因为他们的名字最后都没有在两个数据集中完全相同的位置(虽然内容是同意)。有没有一种方法,我可以修改这里所使用的字符串比较函数/数据结构,这样我可以考虑不同的排序吗?

补充笔记:

r string-comparison fuzzy-comparison record-linkage jaro-winkler
2个回答
1
投票

你有没有想过下面的办法?

记录链接和名称是因为我知道你会知道,困难。理想情况下,你想在其他可用的信息(性别,唯一的标识符,出生日期,位置信息等)的块,然后做名字符串比较。

你提到有千万条记录的大型数据集。不要再观望比data.table包由伟大的马特Dowle(https://stackoverflow.com/users/403310/matt-dowle)。

所述RecordLinkage包相比是缓慢的。你可以很容易地提高了下面的代码考虑使用同音串散列技术,双音位,nysiis等。

# install.packages("data.table")
library(RecordLinkage)
library(data.table)

data1 <- as.data.frame(list("lname" = c("lolli gaggen nazeeem", "lolli gaggen nazeem", "lollly gaggen nazeem", "matt dowle", "john-smith"),
                           "bday" = c("1908-08-08", "1979-12-12", "1560-06-06", "1979-12-12", "1560-06-06") ) )

data2 <- as.data.frame(list("lname" = c("lolli", "gaggen", "nazeem", "m dowl", "johnny smith"),
                           "bday" = c("1908-08-08", "1979-12-12", "1560-06-06", "1979-12-12", "1560-06-06") ) )


# Coerce to data.tables
setDT(data1)
setDT(data2)

# Define a regex split (we will split all words based on space or hyphen)
split <- " |-"

# Apply a blocking strategy based on bday. Ideally your dataset would allow for additional blocking strategies(?).
block_pairs <- merge(data1, data2, by = "bday", all = T,
            sort = TRUE, suffixes = c(".x", ".y"))

# Store the split up components of each comparison variable.
split1 <- strsplit(block_pairs[["lname.x"]], split)
split2 <- strsplit(block_pairs[["lname.y"]], split)

# Perform jarowinkler comparisons on each combination of components of each string
fc <- jarowinkler(block_pairs[["lname.x"]], block_pairs[["lname.y"]])
pc <- mapply(function(x, y) max(outer(x, y, jarowinkler)), split1, split2)

# Store the max of the full and partial comparisons
block_pairs[, ("winkler.lname") := mapply(function(x,y) max(x,y), fc, pc)]


# Sort by the jarowinkler score
block_pairs <- block_pairs[order(winkler.lname)]

# Inspect
block_pairs

# 0.96 is an appropriate threshold in this instance
block_pairs <- block_pairs[winkler.lname >= 0.96]

0
投票

此外,我要Khayenes的回答让作为评论概述:

library(gtools)

...

# Store the split up components of each comparison variable.
split1 <- strsplit(block_pairs[["lname.x"]], split)
split2 <- strsplit(block_pairs[["lname.y"]], split)

# Recombine tokens into all possible orderings:
make_combinations <- function(x) {
      # Use permutations from the gtools package
      split_names <- permutations(length(x),length(x),x)
      apply(X=split_names, MARGIN=1, FUN=paste0, collapse=' ')
}

split1 <- lapply(X=split1, FUN=`make_combinations`)
split2 <- lapply(X=split2, FUN=`make_combinations`)

# Perform jarowinkler comparisons on each string combination and append it to the table
block_pairs[ ,("winkler.lname") := mapply(function(x, y) max(outer(x, y, jarowinkler)), split1, split2)]

# Sort by the jarowinkler score
block_pairs <- block_pairs[order(winkler.lname)]

# 0.85 is an appropriate threshold in this instance
block_pairs <- block_pairs[winkler.lname >= 0.85]


      bday           lname.x             lname.y    winkler.lname
1: 1908-08-08  lolli gaggen nazeem         lolli     0.8526316
2: 1560-06-06  lolli gaggen nazeem        nazeem     0.8631579
3: 1979-12-12  lolli gaggen nazeem        gaggen     0.8631579
4: 1979-12-12           matt dowle        m dowl     0.9200000
5: 1560-06-06           john-smith  johnny smith     0.9666667
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