为什么从UDF访问DataFrame会导致NullPointerException？

问题描述 投票：9回答：2

我在执行Spark应用程序时遇到问题。

源代码：

// Read table From HDFS
val productInformation = spark.table("temp.temp_table1")
val dict = spark.table("temp.temp_table2")

// Custom UDF
val countPositiveSimilarity = udf[Long, Seq[String], Seq[String]]((a, b) => 
    dict.filter(
        (($"first".isin(a: _*) && $"second".isin(b: _*)) || ($"first".isin(b: _*) && $"second".isin(a: _*))) && $"similarity" > 0.7
    ).count
)

val result = productInformation.withColumn("positive_count", countPositiveSimilarity($"title", $"internal_category"))

// Error occurs!
result.show

错误消息：

org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 54.0 failed 4 times, most recent failure: Lost task 0.3 in stage 54.0 (TID 5887, ip-10-211-220-33.ap-northeast-2.compute.internal, executor 150): org.apache.spark.SparkException: Failed to execute user defined function($anonfun$1: (array<string>, array<string>) => bigint)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)
    at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
    at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:377)
    at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:231)
    at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:225)
    at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:826)
    at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:826)
    at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
    at org.apache.spark.scheduler.Task.run(Task.scala:99)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:282)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.NullPointerException
    at $anonfun$1.apply(<console>:45)
    at $anonfun$1.apply(<console>:43)
    ... 16 more

Driver stacktrace:
  at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1435)
  at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1423)
  at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1422)
  at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
  at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
  at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1422)
  at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:802)
  at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:802)
  at scala.Option.foreach(Option.scala:257)
  at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:802)
  at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1650)
  at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1605)
  at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1594)
  at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
  at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:628)
  at org.apache.spark.SparkContext.runJob(SparkContext.scala:1918)
  at org.apache.spark.SparkContext.runJob(SparkContext.scala:1931)
  at org.apache.spark.SparkContext.runJob(SparkContext.scala:1944)
  at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:333)
  at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
  at org.apache.spark.sql.Dataset$$anonfun$org$apache$spark$sql$Dataset$$execute$1$1.apply(Dataset.scala:2371)
  at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:57)
  at org.apache.spark.sql.Dataset.withNewExecutionId(Dataset.scala:2765)
  at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$execute$1(Dataset.scala:2370)
  at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collect(Dataset.scala:2377)
  at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2113)
  at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2112)
  at org.apache.spark.sql.Dataset.withTypedCallback(Dataset.scala:2795)
  at org.apache.spark.sql.Dataset.head(Dataset.scala:2112)
  at org.apache.spark.sql.Dataset.take(Dataset.scala:2327)
  at org.apache.spark.sql.Dataset.showString(Dataset.scala:248)
  at org.apache.spark.sql.Dataset.show(Dataset.scala:636)
  at org.apache.spark.sql.Dataset.show(Dataset.scala:595)
  at org.apache.spark.sql.Dataset.show(Dataset.scala:604)
  ... 48 elided
Caused by: org.apache.spark.SparkException: Failed to execute user defined function($anonfun$1: (array<string>, array<string>) => bigint)
  at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown Source)
  at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
  at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:377)
  at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:231)
  at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:225)
  at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:826)
  at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:826)
  at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
  at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
  at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
  at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
  at org.apache.spark.scheduler.Task.run(Task.scala:99)
  at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:282)
  ... 3 more
Caused by: java.lang.NullPointerException
  at $anonfun$1.apply(<console>:45)
  at $anonfun$1.apply(<console>:43)
  ... 16 more

我已检查productInformation中的dict和Columns是否具有空值。但是没有空值。

有人可以帮我吗？我附上了示例代码，让您了解更多详细信息：

case class Target(wordListOne: Seq[String], WordListTwo: Seq[String])
val targetData = Seq(Target(Seq("Spark", "Wrong", "Something"), Seq("Java", "Grape", "Banana")),
                     Target(Seq("Java", "Scala"), Seq("Scala", "Banana")),
                     Target(Seq(""), Seq("Grape", "Banana")),
                     Target(Seq(""), Seq("")))
val targets = spark.createDataset(targetData)

case class WordSimilarity(first: String, second: String, similarity: Double)
val similarityData = Seq(WordSimilarity("Spark", "Java", 0.8), 
                     WordSimilarity("Scala", "Spark", 0.9), 
                     WordSimilarity("Java", "Scala", 0.9),
                     WordSimilarity("Apple", "Grape", 0.66),
                     WordSimilarity("Scala", "Apple", -0.1),
                     WordSimilarity("Gine", "Spark", 0.1)) 
val dict = spark.createDataset(similarityData)

val countPositiveSimilarity = udf[Long, Seq[String], Seq[String]]((a, b) => 
    dict.filter(
        (($"first".isin(a: _*) && $"second".isin(b: _*)) || ($"first".isin(b: _*) && $"second".isin(a: _*))) && $"similarity" > 0.7
    ).count
)

val countDF = targets.withColumn("positive_count", countPositiveSimilarity($"wordListOne", $"wordListTwo"))

这是示例代码，与我的原始代码相似。示例代码运行良好。我应在哪一点检入原始代码和数据？

scala apache-spark
2个回答
10
投票
非常有趣的问题。我必须进行一些搜索，但这是我的。希望这会对您有所帮助。

当您通过Dataset创建createDataset时，spark将为该数据集分配LocalRelation逻辑查询计划。

def createDataset[T : Encoder](data: Seq[T]): Dataset[T] = { val enc = encoderFor[T] val attributes = enc.schema.toAttributes val encoded = data.map(d => enc.toRow(d).copy()) val plan = new LocalRelation(attributes, encoded) Dataset[T](self, plan) } 

跟随此link：LocalRelation is a leaf logical plan that allow functions like collect or take to be executed locally, i.e. without using Spark executors.
而且，正如[C​​0]方法指出的那样，这是正确的>
isLocal
很明显，您可以检查您的2个数据集是本地的。 
而且 /**
   * Returns true if the `collect` and `take` methods can be run locally
   * (without any Spark executors).
   *
   * @group basic
   * @since 1.6.0
   */
  def isLocal: Boolean = logicalPlan.isInstanceOf[LocalRelation]
方法实际上是在内部调用show。
take
因此，基于这些证据，我认为调用private[sql] def showString(_numRows: Int, truncate: Int = 20): String = {
    val numRows = _numRows.max(0)
    val takeResult = toDF().take(numRows + 1)
    val hasMoreData = takeResult.length > numRows
    val data = takeResult.take(numRows)
已执行，其行为类似于从
driver
在countDF.show数据集上调用count时，调用次数是的记录数。 dict。而且，targets数据集对于dict作品的演出当然不需要是本地的。您可以尝试保存countDF，它将为您提供与第一种情况相同的例外countDF
4
投票
您不能在org.apache.spark.SparkException: Failed to execute user defined function($anonfun$1: (array<string>, array<string>) => bigint)内使用Dataframe。您需要加入udf和productInformation，并在加入后执行dict逻辑。
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