当使用geom_smooth绘图时,我试图将lm线扩展到数据范围之外。但是,设置fullrange = TRUE似乎不起作用。
我已经使用coord_cartesian和scale_x_log10将xlim设置为超出数据范围,如代码所示。
library(ggplot2)
df<-data.frame(Time=c(1:9 %o% 10^(2:3),10^4),Shift=seq(0.01,0.03,length.out=19),Treatment=2.2)
df<-rbind(df,data.frame(Time=c(1:9 %o% 10^(2:3),10^4),Shift=seq(0.02,0.06,length.out=19),Treatment=2.4))
df<-rbind(df,data.frame(Time=c(1:9 %o% 10^(2:3),10^4),Shift=seq(0.06,0.14,length.out=19),Treatment=2.6))
df<-rbind(df,data.frame(Time=c(1:9 %o% 10^(2:3),10^4),Shift=seq(0.09,0.22,length.out=19),Treatment=2.8))
myPlot <- ggplot(df,aes(x=Time,y=Shift,col=as.factor(Treatment))) +
scale_y_log10(breaks = c(1 %o% 10^(-2:1)), minor_breaks = c(1:9 %o% 10^(-1:2)),labels=paste0(c(1 %o% 10^(0:3)),"%")) +
scale_x_log10(breaks = c(1 %o% 10^(2:9)), minor_breaks = c(1:9 %o% 10^(0:10))) +
labs(color="Treatment") +
coord_cartesian(xlim=c(100,1E9),ylim=c(0.001,1))+
theme_bw() +
annotation_logticks() +
geom_point()+
geom_smooth(method="lm",fullrange=TRUE)
plot(myPlot)
lm行在数据末尾停止:
如果在scale_*_log10()
而不是coord_cartesian()
中设置限制,则在整个范围内显示线性模型:
myPlot <- ggplot(df,aes(x=Time,y=Shift,col=as.factor(Treatment))) +
scale_y_log10(limits = c(0.001, 1), breaks = c(1 %o% 10^(-2:1)), minor_breaks = c(1:9 %o% 10^(-1:2)),labels=paste0(c(1 %o% 10^(0:3)),"%")) +
scale_x_log10(limits = c(100, 1e9), breaks = c(1 %o% 10^(2:9)), minor_breaks = c(1:9 %o% 10^(0:10))) +
labs(color="Treatment") +
theme_bw() +
annotation_logticks() +
geom_point()+
geom_smooth(method="lm",fullrange=TRUE)
plot(myPlot)
但是,由于比例上的设置限制会删除超出这些限制的数据,因此灰色错误带不会延伸到行的末尾。这可以通过在比例尺上设置更大的限制然后使用coord_cartesian()
again来修改:
myPlot <- ggplot(df,aes(x=Time,y=Shift,col=as.factor(Treatment))) +
scale_y_log10(limits = c(0.001, 3), breaks = c(1 %o% 10^(-2:1)), minor_breaks = c(1:9 %o% 10^(-1:2)),labels=paste0(c(1 %o% 10^(0:3)),"%")) +
scale_x_log10(limits = c(100, 1e9), breaks = c(1 %o% 10^(2:9)), minor_breaks = c(1:9 %o% 10^(0:10))) +
labs(color="Treatment") +
coord_cartesian(xlim=c(100,1E9),ylim=c(0.001,1)) +
theme_bw() +
annotation_logticks() +
geom_point()+
geom_smooth(method="lm",fullrange=TRUE)
plot(myPlot)